Computational Model Library

Our mission is to help computational modelers develop, document, and share their computational models in accordance with community standards and good open science and software engineering practices. Model authors can publish their model source code in the Computational Model Library with narrative documentation as well as metadata that supports open science and emerging norms that facilitate software citation, computational reproducibility / frictionless reuse, and interoperability. Model authors can also request private peer review of their computational models. Models that pass peer review receive a DOI once published.

All users of models published in the library must cite model authors when they use and benefit from their code.

Please check out our model publishing tutorial and feel free to contact us if you have any questions or concerns about publishing your model(s) in the Computational Model Library.

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Ornstein-Uhlenbeck Pandemic package

Peter Cotton | Published Friday, April 24, 2020 | Last modified Friday, May 08, 2020

Pandemic (pip install pandemic)

An agent model in which commuting, compliance, testing and contagion parameters drive infection in a population of thousands of millions. Agents follow Ornstein-Uhlenbeck processes in the plane and collisions drive transmission. Results are stored at SwarmPrediction.com for further analysis, and can be retrieved by anyone.

This is a very simple simulation that in a special case can be shown to be approximated by a compartmental model with time varying infection rate.

This ABM re-implements and extends the simulation model of peer review described in Squazzoni & Gandelli (Squazzoni & Gandelli, 2013 - doi:10.18564/jasss.2128) (hereafter: ‘SG’). The SG model was originally developed for NetLogo and is also available in CoMSES at this link.
The purpose of the original SG model was to explore how different author and reviewer strategies would impact the outcome of a journal peer review system on an array of dimensions including peer review efficacy, efficiency and equality. In SG, reviewer evaluation consists of a continuous variable in the range [0,1], and this evaluation scale is the same for all reviewers. Our present extension to the SG model allows to explore the consequences of two more realistic assumptions on reviewer evaluation: (1) that the evaluation scale is discrete (e.g. like in a Likert scale); (2) that there may be differences among their interpretation of the grades of the evaluation scale (i.e. that the grade language is heterogeneous).

The model aims to investigate the role of Microfinance Institutes (MFIs) in strengthening the coping capacity of slum-dwellers (residents) in case of frequent disasters. The main purpose of the model is system understanding. It aids in understanding the following research question: Are the microcredits provided by MFI to start a small business helpful in increasing coping capacity of a slum dweller for recovering from frequent and intense disasters?

TeleABM

Yue Dou | Published Tuesday, December 10, 2019 | Last modified Wednesday, April 29, 2020

We construct a new type of agent-based model (ABM) that can simultaneously simulate land-use changes at multiple distant places (namely TeleABM, telecoupled agent-based model). We use soybean trade between Brazil and China as an example, where Brazil is the sending system and China is the receiving system because they are the world’s largest soybean exporter and importer respectively. We select one representative county in each country to calibrate and validate the model with spatio-temporal analysis of historical land-use changes and the empirical analysis of household survey data. The whole model is programmed on RePast Simphony. The most unique features of TeleABM are that it can simulate a telecoupled system and the flows between sending and receiving systems in this telecoupled system.

We reconstruct Cohen, March and Olsen’s Garbage Can model of organizational choice as an agent-based model. We add another means for avoiding making decisions: buck-passing difficult problems to colleagues.

This article presents an agent-based model of an Italian textile district where thousands of small firms specialize in particular phases of fabrics production. It reconstructs the web of communication between firms as they arrange production chains. In turn, production chains result in road traffic between the geographical areas on which the district extends. The reconstructed traffic exhibits a pattern that has been observed, but not foreseen, by policy makers.

Cultural Spread

Salvador Pardo Gordó Salvador Pardo-Gordó | Published Thursday, April 02, 2015 | Last modified Thursday, April 23, 2020

The purpose of the model is to simulate the cultural hitchhiking hypothesis to explore how neutral cultural traits linked with advantageous traits spread together over time

The application of a smartphone application to register physical encounters between individuals is considered by public health authorities, as a means to reduce the number of infections in the 2020 COVID-19 pandemic. The general idea is that continuous registration of all other smartphones in the vicinity of an individual’s smartphone potentially enables early warning of the owners of the other smartphones, in case the individual is tested positive as infected. Those other individuals can then go into isolation and be considered for testing. The purpose of the present simulation is to explore the potential effects of this application on frequencies of infection, isolation, and positive and negative infection test results.

Our model is hybrid agent-based and equation based model for human air-borne infectious diseases measles. It follows an SEIR (susceptible, exposed,infected, and recovered) type compartmental model with the agents moving be-tween the four state relating to infectiousness. However, the disease model canswitch back and forth between agent-based and equation based depending onthe number of infected agents. Our society model is specific using the datato create a realistic synthetic population for a county in Ireland. The modelincludes transportation with agents moving between their current location anddesired destination using predetermined destinations or destinations selectedusing a gravity model.

Network-Based Trust Games

Bin-Tzong Chie | Published Thursday, August 22, 2013 | Last modified Wednesday, April 15, 2020

The network-based trust game is a hybridization of both the repeated trust games and the network games.

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