Computational Model Library

Our mission is to help computational modelers develop, document, and share their computational models in accordance with community standards and good open science and software engineering practices. Model authors can publish their model source code in the Computational Model Library with narrative documentation as well as metadata that supports open science and emerging norms that facilitate software citation, computational reproducibility / frictionless reuse, and interoperability. Model authors can also request private peer review of their computational models. Models that pass peer review receive a DOI once published.

All users of models published in the library must cite model authors when they use and benefit from their code.

Please check out our model publishing tutorial and feel free to contact us if you have any questions or concerns about publishing your model(s) in the Computational Model Library.

Displaying 10 of 145 results for "Crooks Andrew" clear search

We establish a double-layer network for China’s financial system, consisting of an interbank lending network and a cross-shareholding network. The loss of diffusion in an interbank lending channel independently, a cross-shareholding channel independently and a double-layer contagion channel after one of the financial institutions goes bankrupt with an initial shock are simulated to explore the nonlinear evolution mechanism of financial risk and impact factors of financial systemic risk in China.

The effect of error on cultural transmission

Claudine Gravel-Miguel | Published Thursday, November 01, 2012 | Last modified Saturday, April 27, 2013

This is the replication of the experiment performed by Eerkens and Lipo (2005) to look at the effect of copying errors when specific traits are transferred from an individual to another.

Manipulate[
Module[{fDot, mDot, poly, roots, stableRoots, rStar, rIso,
endPointStar, endPointIso},(1. Define the System Dynamics)
fDot = phi1(f/m) - phi2(m/f);
mDot = mu1(f/m) - mu2(m/f);
(*2. Find the Equilibrium Ratio r=f/
…

This Python agent-based model simulates the diffusion of instructional practices among primary-school science teachers connected through within-school and cross-school networks. It represents teachers as agents nested in schools and compares five adoption mechanisms: simple contagion, proportion thresholds, count thresholds, adaptive norm conformity, and an individual-only baseline. The model evaluates fixed-budget training allocations, including concentrated and distributed policies, and estimates when school-level dose-response evidence can support targeted allocation. Experiments examine peer interference, cross-school contact intensity, global critical transitions, allocation stability, and the distinction between participant-level and system-level outcomes. Teacher attributes are informed by a de-identified Beijing questionnaire, whereas team sizes and contact networks are explicit model assumptions. The package includes executable Python scripts, ODD documentation, parameter tables, experiment metadata, simulation outputs, and the authorized questionnaire workbook required to reproduce the questionnaire-informed analyses. Results are intended as model-based design evidence for future longitudinal research rather than forecasts of adoption rates.

NetLogo agent-based model to simulate the transmission of COVID-19 in a university dormitory. User can set the number of initial students, buildings, floors, rooms, number of initially infected, and transmission rate. They can also test the effect of masks, sanitizations, elevator allowance, and visits on the effect of the SEIR curve.

The model simulates the spread of a virus through a synthetic network with a degree distribution calibrated on close-range contact data. The model is used to study the macroscopic consequences of cross-individual variability in close-range contact frequencies and to assess whether this variability can be exploited for effective intervention targeting high-contact nodes.

This model has been created with and for the researcher-farmers of the Muonde Trust (http://www.muonde.org/), a registered Zimbabwean non-governmental organization dedicated to fostering indigenous innovation. Model behaviors and parameters (mashandiro nemisiyano nedzimwe model) derive from a combination of literature review and the collected datasets from Muonde’s long-term (over 30 years) community-based research. The goals of this model are three-fold (muzvikamu zvitatu):
A) To represent three components of a Zimbabwean agro-pastoral system (crops, woodland grazing area, and livestock) along with their key interactions and feedbacks and some of the human management decisions that may affect these components and their interactions.
B) To assess how climate variation (implemented in several different ways) and human management may affect the sustainability of the system as measured by the continued provisioning of crops, livestock, and woodland grazing area.
C) To provide a discussion tool for the community and local leaders to explore different management strategies for the agro-pastoral system (hwaro/nzira yekudyidzana kwavanhu, zvipfuo nezvirimwa), particularly in the face of climate change.

AGENTS model is an agent-based computational framework designed to explore the socio-ecological and economic dynamics of agricultural production in the Byzantine Negev Highlands, with a focus on viticulture. It integrates historical, environmental, and social factors to simulate settlement sustainability, crop yields, and the impacts of varying climate conditions. The model is built in NetLogo and incorporates GIS-based topographical and hydrological data. Key features include the ability to assess climate impacts on crop profitability and settlement strategies, evaluate economic outputs of ancient vineyards, and simulate agent decision-making processes under diverse scenarios.

The AGENTS model is highly flexible, enabling users to simulate agricultural regimes with any two crops: one cash crop (a crop grown for profit, e.g., grapevines) and one staple crop (a crop grown for subsistence, e.g., wheat). While the default setup models viticulture and wheat cultivation in the Byzantine Negev Highlands, users can adapt the model to different environmental and socio-ecological contexts worldwide—both past and present.

Users can load external files to customize precipitation, evaporation, topography, and labor costs (measured as man-days per 0.1ha, converted to kg of wheat per model patch size area), and can also edit key parameters related to yield calculations. This includes modifying crop-specific yield formulas, soil and runoff indices, and any factors influencing crop performance. The model inherently simulates cash crops grown in floodplain regions and staple crops cultivated along riverbanks, providing a powerful tool to investigate societal resilience and responses to climate stressors across diverse environments.

…

LUXE is a land-use change model featuring different levels of land market implementation. It integrates utility measures, budget constraints, competitive bidding, and market interactions to model land-use change in exurban environment.

Adoption of conservation practices

Irem Daloglu | Published Monday, October 21, 2013

This model is designed to investigate the impact of alternative policy approaches and changing land tenure dynamics on farmer adoption of conservation practices intended to increase the water quality.

Displaying 10 of 145 results for "Crooks Andrew" clear search

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