Computational Model Library

Population dynamics

Marco Janssen | Published Mon Dec 31 00:13:22 2018

Simple population dynamics model used in Introduction to Agent-Based Modeling by Marco Janssen. For more information see https://intro2abm.com/

This is an agent-based model coded in NetLogo. The model simulates population dynamics of bighorn sheep population in the Hell’s Canyon region of Idaho and will be used to develop a better understanding of pneumonia dynamics in bighorn sheep populations. The overarching objective is to provide a decision-making context for effective management of pneumonia in wild populations of bighorn sheep.

The model reflects the predator-prey mustelid-vole population dynamics, typically observed in boreal systems. The goal of the model is to assess which intrinsic and extrinsic factors (or factor combinations) are needed for the generation of the cyclic pattern typically observed in natural vole populations. This goal is achieved by contrasting the alternative model versions by “switching off” some of the submodels in order to reflect the four combinations of the factors hypothesized to be driving vole cycles.

Peer reviewed MIOvPOP

Aniruddha Belsare | Published Wed Sep 18 01:23:57 2019

An ABM simulating white-tailed deer population dynamics for selected Michigan counties. The model yields pre-harvest and post-harvest realistic population snapshots that can be used to initialize the surveillance model (MIOvPOPsurveillance) and the CWD transmission dynamics model (MIOvCWD) respectively.

Peer reviewed lgm_ecodynamics

Colin Wren | Published Mon Apr 22 20:46:09 2019

This is a modification of a model published previous by Barton and Riel-Salvatore (2012). In this model, we simulate six regional populations within Last Glacial Maximum western Europe. Agents interact through reproduction and genetic markers attached to each of six regions mix through subsequent generations as a way to track population dynamics, mobility, and gene flow. In addition, the landscape is heterogeneous and affects agent mobility and, under certain scenarios, their odds of survival.

FoxNet

bhradsky | Published Fri Feb 1 03:55:46 2019 | Last modified Fri Feb 1 05:01:33 2019

FoxNet is an individual-based modelling framework that can be customised to generate high-resolution red fox Vulpes vulpes population models for both northern and southern hemispheres. FoxNet predicts red fox population dynamics, including responses to control and landscape productivity. Model landscapes (up to ~15,000 km^2 and bait layouts can be generated within FoxNet or imported as GIS layers.

If you use FoxNet, please cite:

Hradsky BA, Kelly L, Robley A, Wintle BA (in review). FoxNet: an individual-based modelling framework to support red fox management. Journal of Applied Ecology.

Peer reviewed Emergent Firms Model

J Applegate | Published Fri Jul 13 15:04:37 2018

The Emergent Firm (EF) model is based on the premise that firms arise out of individuals choosing to work together to advantage themselves of the benefits of returns-to-scale and coordination. The Emergent Firm (EF) model is a new implementation and extension of Rob Axtell’s Endogenous Dynamics of Multi-Agent Firms model. Like the Axtell model, the EF model describes how economies, composed of firms, form and evolve out of the utility maximizing activity on the part of individual agents. The EF model includes a cash-in-advance constraint on agents changing employment, as well as a universal credit-creating lender to explore how costs and access to capital affect the emergent economy and its macroeconomic characteristics such as firm size distributions, wealth, debt, wages and productivity.

Replication of ECEC model: Environmental Feedback and the Evolution of Cooperation

Pierre Bommel | Published Tue Apr 5 15:09:08 2011 | Last modified Sat Apr 27 20:18:45 2013

The model, presented here, is a re-implementation of the Pepper and Smuts’ model : - Pepper, J.W. and B.B. Smuts. 2000. “The evolution of cooperation in an ecological context: an agent-based model”. Pp. 45-76 in T.A. Kohler and G.J. Gumerman, eds. Dynamics of human and primate societies: agent-based modeling of social and spatial processes. Oxford University Press, Oxford. - Pepper, J.W. and B.B. Smuts. 2002. “Assortment through Environmental Feedback”. American Naturalist, 160: 205-213 […]

SimAdapt

François Rebaudo | Published Wed Aug 29 12:57:32 2012 | Last modified Mon Oct 13 08:58:37 2014

SimAdapt: An individual-based genetic model for simulating landscape management impacts on populations

Peer reviewed Horse population dynamics

Nika Galic | Published Tue Nov 12 23:23:48 2013 | Last modified Wed Oct 29 17:21:57 2014

This model investigates the link between prescribed growth in body size, population dynamics and density dependence through population feedback on available resources.

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