Computational Model Library

Our mission is to help computational modelers develop, document, and share their computational models in accordance with community standards and good open science and software engineering practices. Model authors can publish their model source code in the Computational Model Library with narrative documentation as well as metadata that supports open science and emerging norms that facilitate software citation, computational reproducibility / frictionless reuse, and interoperability. Model authors can also request private peer review of their computational models. Models that pass peer review receive a DOI once published.

All users of models published in the library must cite model authors when they use and benefit from their code.

Please check out our model publishing tutorial and feel free to contact us if you have any questions or concerns about publishing your model(s) in the Computational Model Library.

Displaying 10 of 64 results for "Arthur Perrotton" clear search

Forager mobility and interaction

L S Premo | Published Thursday, January 10, 2013 | Last modified Saturday, April 27, 2013

This is a relatively simple foraging-radius model, as described first by Robert Kelly, that allows one to quantify the effect of increased logistical mobility (as represented by increased effective foraging radius, r_e) on the likelihood that 2 randomly placed central place foragers will encounter one another within 5000 time steps.

TERRoir level Organic matter Interactions and Recycling model

Myriam Grillot | Published Wednesday, April 19, 2017 | Last modified Wednesday, June 17, 2020

The TERROIR agent-based model was built for the multi-level analysis of biomass and nutrient flows within agro-sylvo-pastoral villages in West Africa. It explicitly takes into account both human organization and spatial extension of such flows.

Next generation of the CHALMS model applied to a coastal setting to investigate the effects of subjective risk perception and salience decision-making on adaptive behavior by residents.

The simulation is a variant of the “ToRealSim OD variants - base v2.7” base model, which is based on the standard DW opinion dynamics model (but with the differences that rather than one agent per tick randomly influencing another, all agents randomly influence one other per tick - this seems to make no difference to the outcomes other than to scale simulation time). Influence can be made one-way by turning off the two-way? switch

Various additional variations and sources of noise are possible to test robustness of outcomes to these (compared to DW model).
In this version agent opinions change following the empirical data collected in some experiments (Takács et al 2016).

Such an algorithm leaves no role for the uncertainties in other OD models. [Indeed the data from (Takács et al 2016) indicates that there can be influence even when opinion differences are large - which violates a core assumption of these]. However to allow better comparison with other such models there is a with-un? switch which allows uncertainties to come into play. If this is on, then influence (according to above algorithm) is only calculated if the opinion difference is less than the uncertainty. If an agent is influenced uncertainties are modified in the same way as standard DW models.

Simulations based on the Axelrod model and extensions to inspect the volatility of the features over time (AXELROD MODEL & Agreement threshold & two model variations based on the Social identity approach)
The Axelrod model is used to predict the number of changes per feature in comparison to the datasets and is used to compare different model variations and their performance.

Input: Real data

This Agent-Based Model is designed to simulate how similarity-based partner selection (homophily) shapes the formation of co-offending networks and the diffusion of skills within those networks. Its purpose is to isolate and test the effects of offenders’ preference for similar partners on network structure and information flow, under controlled conditions.

In the model, offenders are represented as agents with an individual attribute and a set of skills. At each time step, agents attempt to select partners based on similarity preference. When two agents mutually select each other, they commit a co-offense, forming a tie and exchanging a skill. The model tracks the evolution of network properties (e.g., density, clustering, and tie strength) as well as the spread of skills over time.

This simple and theoretical model does not aim to produce precise empirical predictions but rather to generate insights and test hypotheses about the trade-off between partnership stability and information diffusion. It provides a flexible framework for exploring how changes in partner selection preferences may lead to differences in criminal network dynamics. Although the model was developed to simulate offenders’ interactions, in principle, it could be applied to other social processes involving social learning and skills exchange.

ABMIND, the Agent-Based Model of Individual Psychological Distance, is a modeling framework developed to examine how psychological distance influences environmental protection behavior in coastal farming communities in southern China. Using household survey data and empirically estimated behavioral pathways, the model represents how uncertainty shapes four dimensions of psychological distance, namely temporal, spatial, social and hypothetical distance, and how these dimensions guide protection and degradation decisions. Agents include households, government actors and mangrove ecosystem patches, connected through social networks and ecological feedbacks that affect learning, expectations and perceived benefits. Policy interventions such as rewards, penalties and publicity guidance efforts work by modifying uncertainty and psychological distance rather than directly controlling behavior. ABMIND is implemented as a spatially explicit model following the ODD protocol, and a concise user guide is provided. In developing ABMIND we introduce a structured validation workflow that links statistical mediation analysis with simulation-based diagnostics, allowing empirical cognitive mechanisms to be systematically embedded and tested within the ABM. This integrated approach strengthens the credibility of psychological-mechanism models and supports their use in policy evaluation. The framework offers a methodological platform for integrating cognitive mechanisms into agent-based environmental behavior modeling and for evaluating policy strategies that support ecosystem protection.
Model paper:
ABMIND: An empirically informed agent-based model of psychological distance and environmental protection behaviour
Ecological Modelling
https://doi.org/10.1016/j.ecolmodel.2026.111700

This paper develops a spatial agent-based model to examine how fertility regime shifts reshape population concentration and wealth distribution in an abstract urban system. Migration decisions combine population preference, cultural homophily, expected net income, and resource endowment through a standardised softmax utility. The design is deliberately stylised: it is not calibrated to a particular country or city system, but is intended to isolate the feedbacks linking migration, fertility, urban scaling, and accumulated wealth.
The simulations reveal robust directional asymmetry. When fertility shifts from low to high, population concentration responds rapidly; when fertility shifts from high to low, concentration declines only after a detectable delay and may temporarily continue in the previous direction. Wealth adds a second layer of hysteresis: cell total-wealth concentration follows population concentration with delay, cell mean-wealth inequality and system-level wealth indicators are slower still, and phase-space trajectories form loops rather than collapsing onto a single population–wealth curve. Robustness experiments indicate that longer fertility cycles, wider mobility neighbourhoods, and smoother resource landscapes change the magnitude of delay and overshoot, but do not remove the qualitative asymmetry. The paper argues that demographic decline should be understood not as the mirror image of demographic expansion, but as a path-dependent transition mediated by fast migration-income feedbacks and slower fertility, cohort, culture, and wealth mechanisms.

this agent-based model explores the dynamics of volunteer participation in urban community gardens, by combining behavioral theory and institutional theory

The Levers of HIV Model

Arthur Hjorth Wouter Vermeer C. Hendricks Brown Uri Wilensky Can Gurkan | Published Tuesday, March 08, 2022 | Last modified Tuesday, October 31, 2023

Chicago’s demographic, neighborhood, sex risk behaviors, sexual network data, and HIV prevention and treatment cascade information from 2015 were integrated as input to a new agent-based model (ABM) called the Levers-of-HIV-Model (LHM). This LHM, written in NetLogo, forms patterns of sexual relations among Men who have Sex with Men (MSM) based on static traits (race/ethnicity, and age) and dynamic states (sexual relations and practices) that are found in Chicago. LHM’s five modules simulate and count new infections at the two marker years of 2023 and 2030 for a wide range of distinct scenarios or levers, in which the levels of PrEP and ART linkage to care, retention, and adherence or viral load are increased over time from the 2015 baseline levels.

Displaying 10 of 64 results for "Arthur Perrotton" clear search

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