Computational Model Library

Peer reviewed B3GET

Kristin Crouse | Published Thu Nov 14 20:07:16 2019 | Last modified Tue Oct 6 20:13:54 2020

B3GET simulates populations of virtual organisms evolving over generations, whose evolutionary outcomes reflect the selection pressures of their environment. The model simulates several factors considered important in biology, including life history trade-offs, investment in fighting ability and aggression, sperm competition, infanticide, and competition over access to food and mates. Downloaded materials include a starting genotype and population files. Edit the these files and see what changes occur in the behavior of virtual populations!

TERRoir level Organic matter Interactions and Recycling model

Myriam Grillot | Published Wed Apr 19 14:33:44 2017 | Last modified Wed Jun 17 14:13:35 2020

The TERROIR agent-based model was built for the multi-level analysis of biomass and nutrient flows within agro-sylvo-pastoral villages in West Africa. It explicitly takes into account both human organization and spatial extension of such flows.

AMBAWA simulates the flows of biomass between crop and livestock systems at the field, farm, and village scales in order to showcase innovating management practices of soil fertility in West Africa.

Fertility Tradeoffs

Kristin Crouse | Published Tue Nov 5 04:36:42 2019 | Last modified Sun Mar 22 09:45:14 2020

Fertility Tradeoffs is a NetLogo model that illustrates the emergencent tradeoffs between the quality and quantity of offspring. Often, we associate high fitness with maximizing the number of offspring. However, under certain circumstances, it pays instead to optimize the number of offspring, having fewer offspring than is possible. When the number of offspring is reduced, more energy can be invested in each offspring, which can be beneficial for their own fitness.

This model is an extension of the Artificial Long House Valley (ALHV) model developed by the authors (Swedlund et al. 2016; Warren and Sattenspiel 2020). The ALHV model simulates the population dynamics of individuals within the Long House Valley of Arizona from AD 800 to 1350. Individuals are aggregated into households that participate in annual agricultural and demographic cycles. The present version of the model incorporates features of the ALHV model including realistic age-specific fertility and mortality and, in addition, it adds the Black Mesa environment and population, as well as additional methods to allow migration between the two regions.

As is the case for previous versions of the ALHV model as well as the Artificial Anasazi (AA) model from which the ALHV model was derived (Axtell et al. 2002; Janssen 2009), this version makes use of detailed archaeological and paleoenvironmental data from the Long House Valley and the adjacent areas in Arizona. It also uses the same methods as the original AA model to estimate annual maize productivity of various agricultural zones within the Long House Valley. A new environment and associated methods have been developed for Black Mesa. Productivity estimates from both regions are used to determine suitable locations for households and farms during each year of the simulation.

Lethal Geometry

Kristin Crouse | Published Fri Feb 21 11:27:16 2020

Lethal Geometry examines the relationship between territory size and intergroup mortality risk under realistic assumptions. Furthermore, the model investigates how fertility is affected by this relationship. Territory sizes are expected to fluctuate over time in response to individual reproduction, random-walking, and lethal intergroup encounters. In turn, the individuals within these territories are expected to vary in their mortality and fertility rates.

TRUE GRASP

Marco Braasch Luis García-Barrios | Published Tue Apr 3 16:00:30 2018

TRUE GRASP (Tree Recruitment Under Exotic GRAsses in a Savanna-Pineland)
is a socio-ecological agent-based model (ABM) and role playing game (RPG) for farmers and other stakeholders involved in rural landscape planning.

The purpose of this model is to allow actors to explore the individual and combined effects - as well as tradeoffs - of three methods of controlling exotic grasses in pine savannas: fire, weeding, and grazing cattle.

Design of TRUE GRASP is based on 3 years of socio-ecological fieldwork in a human-induced pine savanna in La Sepultura Biosphere Reserve (SBR) in the Mexican state of Chiapas. In this savanna, farmers harvest resin from Pinus oocarpa, which is used to produce turpentine and other products. However, long term persistence of this activity is jeopardized by low tree recruitment due to exotic tall grass cover in the forest understory (see Braasch et al., 2017). The TRUE GRASP model provides the user with different management strategies for controlling exotic grass cover and avoiding possible regime shifts, which in the case of the SBR would jeopardize resin harvesting.

Swidden farming by individual households

C Michael Barton | Published Sun Apr 27 16:49:11 2008 | Last modified Sat Apr 27 20:18:48 2013

Swidden Farming is designed to explore the dynamics of agricultural land management strategies.

Wedding Doughnut

Eric Silverman Jakub Bijak Jason Hilton Viet Cao | Published Thu Dec 20 16:04:09 2012 | Last modified Fri Sep 20 11:42:53 2013

A reimplementation of the Wedding Ring model by Francesco Billari. We investigate partnership formation in an agent-based framework, and combine this with statistical demographic projections using real empirical data.

Peer reviewed Swidden Farming Version 2.0

C Michael Barton | Published Wed Jun 12 23:54:35 2013 | Last modified Wed Sep 3 23:37:34 2014

Model of shifting cultivation. All parameters can be controlled by the user or the model can be run in adaptive mode, in which agents innovate and select parameters.

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