Epidemic Simulation with Transportation Simulation v1.0.0

Moritz Kersting

Epidemic Simulation with Transportation Simulation (version 1.0.0)

Submitted by: FG Econophysics FG Econophysics Software Framework: MATSim Episim Programming Language: Java

The Episim framework builds upon the established transportation simulation MATSim and is capable of tracking agents’ movements within a network and thus computing infection chains. Several characteristics of the virus and the environment can be parametred, whilst the infection dynamics is computed based upon a compartment model. The spread of the virus can be mitigated by restricting the agents’ activity in certain places.

Release Notes

This upload is based on the Episim framework (https://github.com/matsim-org/matsim-episim-libs). The RunEpisim.java file controls the simulations. The required input files can be downloaded from DOI 10.17605/OSF.IO/Z2GX6.

Cite this Model

Moritz Kersting (2021, March 01). “Epidemic Simulation with Transportation Simulation” (Version 1.0.0). CoMSES Computational Model Library. Retrieved from: https://www.comses.net/codebases/d4e5bb89-973d-486b-ab46-26781306ffc9/releases/1.0.0/

Replication of a previously described model

VSP TU Berlin (2020) MATSim Episim development branch - snapshot commit: d796bc4bfdff27d9112f6de5932b7615c9a0420a 07.04.2020. https://github.com/matsim-org/matsim-e565pisim/tree/d796bc4bfdff27d9112f6de5932b7615c9a0420a

Associated Publication(s)

Müller SA, Balmer M, Neumann A, and Nagel K (2020) Mobility traces and spreading of COVID-19. Technische UniversitätBerlin. DOI: http://dx.doi.org/10.14279/depositonce-9835

Joubert JW (2018) Synthetic populations of South African urban areas. Data in Brief 19:1012–1020.DOI:10.1016/j.dib.2018.05.126

Create an Open Code Badge that links to this model more info

This model has not been reviewed by CoMSES Net and should be independently reviewed to meet the Open Code Badge guidelines.

You can use the following HTML or Markdown code to create an Open Code Badge that links to version 1.0.0 of this computational model.


<a href="https://www.comses.net/codebases/d4e5bb89-973d-486b-ab46-26781306ffc9/releases/1.0.0/">
  <img height="100" src="https://www.comses.net/static/images/icons/open-code-badge.png" alt="Open Code Badge">
</a>


[![Open Code Badge](https://www.comses.net/static/images/icons/open-code-badge.png)](https://www.comses.net/codebases/d4e5bb89-973d-486b-ab46-26781306ffc9/releases/1.0.0/)

Download Version 1.0.0

Contributors

Moritz Kersting

DOI

No assigned DOI

Model Version

1.0.0

License

GPL-3.0

Operating System

Operating System Independent

Programming Language

Java

Dependencies

None listed

Publish Date

Monday, March 01, 2021

Last Updated

Monday, March 01, 2021

Downloads 128

Peer Review

Unreviewed

Model Versions

Version	Submitter	First published	Last modified	Status
1.0.0	FG Econophysics FG Econophysics	Mon Mar 1 21:30:38 2021	Mon Mar 1 21:30:38 2021	Published

Computational Model Library