About the CoMSES Model Library more info
CoMSES Net maintains cyberinfrastructure to foster FAIR data principles for access to and (re)use of computational models. Model authors can publish their model code in the Computational Model Library with documentation, metadata, and data dependencies and support these FAIR data principles as well as best practices for software citation. Model authors can also request that their model code be peer reviewed to receive a DOI. All users of models published in the library must cite model authors when they use and benefit from their code.
Please check out our model archive tutorial or contact us if you have any questions or concerns about archiving your model.
CoMSES Net also maintains a curated database of over 7500 publications of agent-based and individual based models with additional metadata on availability of code and bibliometric information on the landscape of ABM/IBM publications that we welcome you to explore.
Varying effects of connectivity and dispersal on interacting species dynamics
Kehinde Salau | Published Mon Aug 29 08:01:17 2011 | Last modified Sat Apr 27 20:18:53 2013An agent-based model of species interaction on fragmented landscape is developed to address the question, how do population levels of predators and prey react with respect to changes in the patch connectivity as well as changes in the sharpness of threshold dispersal?
Hybrid fish-plankton model
Gudrun Wallentin Christian Neuwirth | Published Fri Oct 28 17:54:17 2016 | Last modified Sun Jan 29 07:32:14 2017A hybrid predator-prey model of fish and plankton that switches dynamically between ABM and SD representations. It contains 6 related structural designs of the same model.
Soil microbe-predator model with enzymes
Randall Boone John C Moore Akihiro Koyama Kirstin Holfelder | Published Thu Nov 21 20:04:40 2013We seek to improve understanding of roles enzyme play in soil food webs. We created an agent-based simulation of a simple food web that includes enzymatic activity. The model was used in a publication, Moore et al. (in press; Biochemistry).
Mast seeding model
Lucia Tamburino Giangiacomo Bravo | Published Sat Sep 8 05:54:44 2012 | Last modified Sat Apr 27 20:18:37 2013Purpose of the model is to perform a “virtual experiment” to test the predator satiation hypothesis, advanced in literature to explain the mast seeding phenomenon.
Peer reviewed PPHPC - Predator-Prey for High-Performance Computing
Nuno Fachada | Published Sat Aug 8 16:27:27 2015 | Last modified Wed Nov 25 17:23:09 2015PPHPC is a conceptual model for studying and evaluating implementation strategies for spatial agent-based models (SABMs). It is a realization of a predator-prey dynamic system, and captures important SABMs characteristics.
Landscape connectivity and predator–prey population dynamics
Jacopo Baggio | Published Thu Nov 10 19:35:38 2011 | Last modified Sat Apr 27 20:18:37 2013A simple model to assess the effect of connectivity on interacting species (i.e. predator-prey type)